Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941788.1_cds_XP_016485535.1_76453
CDS Infomation

[gene=LOC107805941] [db_xref=GeneID:107805941] [protein=TMV resistance protein N-like] [protein_id=XP_016485535.1] [location=join(2896..4116,4331..4606,4717..5772,6118..6567)] [gbkey=CDS]
Sequence

ATGGCAATTCCCGTTATTGTTCAAGAAGCAAATGAATCAAAGGATCAGCTGTATGGTGTT
CTTTTTTGTTTTTTTGGCCTTTTGTTGTGTTTAGCTGAACCAAGTTATTTCAGGTTTGAA
TCAAAATTTATCCGTATTATCATTGAGGAAGTCTTACACGAAGTCAAATCTCGAACACCC
CTTTATGTTACCAAGCACCCCGTGGCTCTTTCTCCCCGTGTTAATCAAATAGAGAAGTTA
TTGTTCAAAGGAGACGGTGATGATGTTCGTGTGATTGGGATTCACGGCATGGGTGGAATT
GGCAAAACAACTCTTGCAAAAGCTGTGTTTAACCAAGTTTTTCAGCATTTCGAGGCAAGT
TGCTTTCTTGAAAATGTGAAATCAGAGGCTTCTGAAAGACATAATGGATTAGTTCATTTA
CAAGAGCAACTTCTTGGAACGATTCTTAGGAGAAAGATCAAAGTGCACAATGTGGATGAG
GGCATTACATTGATCAAAGAAGGGATTTGGCAGAAAAAGGTTTTCATAGTCCTTGATGAT
GTGGATGATCAATGCCAGTTAAATGCATTACTTGGAGAACGTGATTGGCTTCGCCCGGGT
AGTAGAGTTGTTATAACAACCCGAGACAAGCATTTGCTCAAAGAACTACATTTGAATGAG
CAATATGAAGCCATGAAATTGGATCACAAAAGCTCTTTACAACTCTTCACTTTACATGCC
TTTAGAAATGCACCACCGGCTGAAGACTATAGTATGCTTGTCGATGGCATTGTAACTTAC
TGTGCAGGAGTTCCACTGGCTCTTCAAGTTTTGGGCGCTTATTTGTCTGATAAAAAGATT
GAAGAATGGAAAAATGCAGTGGACAAATTAAAGATGATTCCTTCTAACGATATTCATACA
AAACTCAGAATAAGCTTTGATGGACTTCCTGATGATTTTACTAAAGCTGCTTTCCTTGAT
ATTGCTTATTTCTTCTTCAAAATCCAGAAGAGTGAGGTCGTAGGTATATTCACAGCTTGC
GGTTTCTACCCTGAGGTTGAAATTTGCGAATTGATTGACAAATCTTTGTTAACAATCGAT
GAAAATAAGCATTTGAATATGCATAATTTGATCCGGGATATGGGACGAGAAATTGTTCAT
AGGGAATCACCCGATAACCCGGGGAAGCGTAGCAGATTATGGTGCGCTAAAGACATTTCC
GATGTACTCATAGGACACAAGGGCACAAAAGCAGTTGAAGGAATAGTCCTTGAATCTTCA
GCATTGAAGGAAGTACCTTTTAGTACAAAAGCATTTGAAAAAATGGCCAAGTTAAGACTC
CTACGCATCAATCATTTGCAGTTATATGGAAGTTTTCAGTATTTACCAAAGTCACTAAAA
TATTTGCATTGGCACTATTGTCCTTTGAAATGCTTGCCATCTGACTTTTGTCTGGAGAAT
CTTGTCATTCTCAACATGAGTTTTGGCAAATTCAAGGAATCCCAAGCGCCGTTAAAGTAT
TTCAAGTGTTTGAAGAGCTTGGTATTCTACAGTTGTGAGTATCTCAAGAAATCCCCAGAG
TTTGTTGGTTTACATAGTCTTGAGAAGTTATCATTTGGTTATTGCTCAAATTTAATGGGA
TTGGACTCAACAATTGGAGAATTGAAGAGACTTCGTATTTTAAACGTAGCTGATTGTAAG
AACCTACGAGAACTCCCACGAAGAATCTGTGAGTTAAAATCACTTGAAATCTTATATCTC
GATAGCTGCACAAAACTAGAAGAATTGCCTGATGATTTGGGAAAGTTGGAAGGTCTGAAA
GAGTTGAATGCAGTTGCAACAGCTATTACAAGATTACCTGGTTCTGTTGGACATTTAAAG
AACTTAGAGATGCTATTGCTATTACAGGACCTCGTATTGAAAAGACAATCCAAATTTTCG
GACATATTCTCAACTTGGTTGCAACCAAAAGGAAGCCTTAGTAGAGTGGGATATTTACCT
TCTTCAGTTTCAAGTTTAAGTGCTTTAAAAGTTTTACAAATTGAGAACTGGAATATGACT
GAAGATGATATTCCTTTTTCTCTTGCGAGTTTATCATCTTTACAGAATCTATGTTTTAGC
AATAATAAGTTTCATGTTATACCTTTCAACCTTTGTGACCTTTCTAGTCTCAAGCATCTG
AATTTAAGCGAATGTCCGAATCTTAAAAGTATCCCTGAAATTCCTCCCACTCTTCAGAAT
CTCAGAGCTTATAATTGCAAGTCGTTAGAGAGACTTCCAAATTTGTCAGGTTTGAAAAGG
TTGAAGGAACTGGAATTGTTTCGTTGTGAAATGTTGACGGAGATTCAAGGGTTGGAGAAC
CTTGATTCTGTTAGAGAAATAAGTTTATGGAGCTGCAAGAGTTTTGGAAGACTACTTGAC
GTATCTAACTTGAGTAAATTGAAGAACTTGGATCTTAGTCACTGCGAAAGATTGATAGAG
ATTCGAGGCTTGGACAACCTTCGTTCCATACGCTACATCAACTTATTCAATTGCAAGGGT
CTCAAAAATCCTTTCACTGAAAACTTCTTCAAAGTCCATTATGAACATGGTAGTGAGCTC
CAACTAGGGCTTTGCAACAGCAATGTTCCGAATTGGTTTAGCTACAAAGTAGATGGATGT
TCAATGTGCTTCAATATGCCTCTACAAGTGGAGAGTACATTCTTGGGCATGTTTCTTTGG
GTTGTTTATGGAACAGTGGATGAAACTAAAAATGTTTATCCTAAAGCCACCATTGTCGAT
GAAACAAATGGCGTTGAGTTTAACCATCGTCTGTGGACAACCATATCCTTTGCAGAAAAC
TCGTCCATCCATTACATACCACGAAATTACTTCAAATGTCCGGTTAAAGGCAGAGAAACG
ATGAGCATTCTTATTGAATGCTATGACTTTCCAACTGAAGATTTTGTTAAGAAATGTGGA
GTTTATCTGTTGTACAAAGACAAGAATGGCCCGGTTCATTCTTTGTCTCCTGGTTTTCTT
TAG

Peptide Sequence

PEP ID

XP_016485535.1
PEP Infomation

PREDICTED: TMV resistance protein N-like [Nicotiana tabacum]
Sequence

MAIPVIVQEANESKDQLYGVLFCFFGLLLCLAEPSYFRFESKFIRIIIEEVLHEVKSRTP
LYVTKHPVALSPRVNQIEKLLFKGDGDDVRVIGIHGMGGIGKTTLAKAVFNQVFQHFEAS
CFLENVKSEASERHNGLVHLQEQLLGTILRRKIKVHNVDEGITLIKEGIWQKKVFIVLDD
VDDQCQLNALLGERDWLRPGSRVVITTRDKHLLKELHLNEQYEAMKLDHKSSLQLFTLHA
FRNAPPAEDYSMLVDGIVTYCAGVPLALQVLGAYLSDKKIEEWKNAVDKLKMIPSNDIHT
KLRISFDGLPDDFTKAAFLDIAYFFFKIQKSEVVGIFTACGFYPEVEICELIDKSLLTID
ENKHLNMHNLIRDMGREIVHRESPDNPGKRSRLWCAKDISDVLIGHKGTKAVEGIVLESS
ALKEVPFSTKAFEKMAKLRLLRINHLQLYGSFQYLPKSLKYLHWHYCPLKCLPSDFCLEN
LVILNMSFGKFKESQAPLKYFKCLKSLVFYSCEYLKKSPEFVGLHSLEKLSFGYCSNLMG
LDSTIGELKRLRILNVADCKNLRELPRRICELKSLEILYLDSCTKLEELPDDLGKLEGLK
ELNAVATAITRLPGSVGHLKNLEMLLLLQDLVLKRQSKFSDIFSTWLQPKGSLSRVGYLP
SSVSSLSALKVLQIENWNMTEDDIPFSLASLSSLQNLCFSNNKFHVIPFNLCDLSSLKHL
NLSECPNLKSIPEIPPTLQNLRAYNCKSLERLPNLSGLKRLKELELFRCEMLTEIQGLEN
LDSVREISLWSCKSFGRLLDVSNLSKLKNLDLSHCERLIEIRGLDNLRSIRYINLFNCKG
LKNPFTENFFKVHYEHGSELQLGLCNSNVPNWFSYKVDGCSMCFNMPLQVESTFLGMFLW
VVYGTVDETKNVYPKATIVDETNGVEFNHRLWTTISFAENSSIHYIPRNYFKCPVKGRET
MSILIECYDFPTEDFVKKCGVYLLYKDKNGPVHSLSPGFL

Transcript Sequence

Gene sequence data has not been registered.